Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMKAGAQTLGLATGSSPITFYEEIVKSNLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAKPFKENNLPNGLAKDLKEEIKRYDAVINANPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFFNSIDDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
2RI0 Chain:A ((2-232))
MKTIKVKNKTEGSKVAFRMLEEEITFGAKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNGLAADLAKETEYYDQILAQYPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI
General information:
TITO was launched using:
RESULT:
Template:
2RI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136897 for 1948 contacts (-70.3/contact) +
2D Compatibility (PS) -25286 + (NN) -15196 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7300
Total energy: -211079.0 ( -108.36 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2RI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI0-query.scw
PDB file :
Tito_Scwrl_2RI0.pdb
: