Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNTCGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVASYLKKYP-QPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILV-GYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDYLFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAP--ELGLGNGPVNHTSYQGD
1JXI Chain:B ((29-283))
-------LTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLA-MGCEAVLMKG--------DWLF-TREGEQRF---RVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQADTLEVGKGIGPVHHFHAWW-
General information:
TITO was launched using:
RESULT:
Template:
1JXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158019 for 2087 contacts (-75.7/contact) +
2D Compatibility (PS) -25688 + (NN) -5233 + (LL) 1268
1D Compatibility (HY) -18800 + (ID) 5450
Total energy: -211922.0 ( -101.54 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1JXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JXI-query.scw
PDB file :
Tito_Scwrl_1JXI.pdb
: