Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
3QHQ Chain:A ((1-221))
MVKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
General information:
TITO was launched using:
RESULT:
Template:
3QHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174031 for 1502 contacts (-115.9/contact) +
2D Compatibility (PS) -23264 + (NN) -3407 + (LL) 0
1D Compatibility (HY) -40400 + (ID) 11000
Total energy: -252102.0 ( -167.84 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3QHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QHQ-query.scw
PDB file :
Tito_Scwrl_3QHQ.pdb
: