Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKAVHHIAIIVSDYEKSKDFYVNKLGFEIIRENHRPERHDYKLDLRCGDIELEIFGNRLDDPEYETPPQRIGRPNWPREACGLRHLAFYVPDVEAYKIELENLGIFVEPIRYDDYTGKKMTFFFDPDGLPLELHE
3L7T Chain:C ((2-134))
-KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERI---SWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE
General information:
TITO was launched using:
RESULT:
Template:
3L7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45861 for 844 contacts (-54.3/contact) +
2D Compatibility (PS) -14213 + (NN) -6292 + (LL) -4
1D Compatibility (HY) -17600 + (ID) 5300
Total energy: -89270.0 ( -105.77 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3L7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L7T-query.scw
PDB file :
Tito_Scwrl_3L7T.pdb
: