Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAGQYYRPSAPELRKDREVALKNMQAFNN--EDNSSKRNVILQKWFGATGKSIHMEQRFVCDYGCNIYVGENFYANFNQTFLDVCEIRIGDNCMFGPNCQLLTPLHPLDPIERNSGLEYGAPIQIGNNVWLGGGVTILPGVVLGDNVVVGAGSVVTKSFENNVVIAGNPAKIIKKLA
2IC7 Chain:A ((3-184))
-SEKEKMLAGHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWLK
General information:
TITO was launched using:
RESULT:
Template:
2IC7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134298 for 1412 contacts (-95.1/contact) +
2D Compatibility (PS) -20334 + (NN) -12492 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 4900
Total energy: -189016.0 ( -133.86 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_2IC7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC7-query.scw
PDB file :
Tito_Scwrl_2IC7.pdb
: