Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIANYLLIEKNEERYTISLTPELQDDLGTVGYVEFTDDTNLEVDDVILNIEASKTVMAILSPLTGKVVKVNTAASQEPTLLNSEKADENWLVVLTDVDYAAFEALENA
5A35 Chain:A ((1-110))
MKKIANYLLIEKTDDRYTISMTPELQDDIGTIGYAEFTDNDHLAVDDIILNLEASKTVMSVLSPLAGAVVERNEAATLTPTLLNSEKAEENWIVVLTDVDQAAFDALEDA
General information:
TITO was launched using:
RESULT:
Template:
5A35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66007 for 827 contacts (-79.8/contact) +
2D Compatibility (PS) -11831 + (NN) -963 + (LL) 0
1D Compatibility (HY) -13600 + (ID) 4100
Total energy: -96501.0 ( -116.69 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_5A35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A35-query.scw
PDB file :
Tito_Scwrl_5A35.pdb
: