Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQV--LSKNPIHLDVMDEHNPKIINHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRISLLACGDTGQGALADISTILKCIQEVAN
1QZU Chain:A ((18-196))
RKFHVLVGVTGSVAALKLPLLVSKLL--GLEVAVVTTERAKHFYSPQDIPVTLYSDADEWE-MWKSR-SDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIP------------------VGTIVDKVKEV--
General information:
TITO was launched using:
RESULT:
Template:
1QZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135587 for 1217 contacts (-111.4/contact) +
2D Compatibility (PS) -16199 + (NN) -1962 + (LL) 832
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: -170466.0 ( -140.07 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1QZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QZU-query.scw
PDB file :
Tito_Scwrl_1QZU.pdb
: