Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLEERILKDGDVLGENILKVDSFLTHQVDFELMQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSLARIKAFENGRVVFAEADA
2FXV Chain:A ((1-190))
MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQ---
General information:
TITO was launched using:
RESULT:
Template:
2FXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167397 for 1536 contacts (-109.0/contact) +
2D Compatibility (PS) -20984 + (NN) -6309 + (LL) 212
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -221278.0 ( -144.06 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2FXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FXV-query.scw
PDB file :
Tito_Scwrl_2FXV.pdb
: