Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMDWETFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR
2BE3 Chain:A ((4-206))
MTLEWEEFLDPYIQAVGELKIKLRGIRKQYRKQNKHSPIEFVTGRVKPIESIKEKMARRGITYATLEHDLQDIAGLRVMVQFVDDVKEVVDILHKRQDMRIIQERDYITHRKASGYRSYHVVVEYTVDTINGAKTILAEIQIRTLAMNFWATIEHSLNYKYQGDFPDEIKKRLEITARIAHQLDEEMGEIRDDIQEAQALFDP--------------------
General information:
TITO was launched using:
RESULT:
Template:
2BE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84198 for 1425 contacts (-59.1/contact) +
2D Compatibility (PS) -22260 + (NN) -11659 + (LL) 324
1D Compatibility (HY) -26000 + (ID) 7850
Total energy: -151643.0 ( -106.42 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2BE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BE3-query.scw
PDB file :
Tito_Scwrl_2BE3.pdb
: