Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
3KEO Chain:A ((6-212))
-----SIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHL-DSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
General information:
TITO was launched using:
RESULT:
Template:
3KEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158546 for 1483 contacts (-106.9/contact) +
2D Compatibility (PS) -22914 + (NN) -12902 + (LL) 812
1D Compatibility (HY) -30400 + (ID) 10300
Total energy: -234250.0 ( -157.96 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_3KEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KEO-query.scw
PDB file :
Tito_Scwrl_3KEO.pdb
: