Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIKYILSFENIIAIFFIVLFGLLLIRIEPVNNSVYSIISGIAIDKVIIVIISSFVIAIFSAFFIIDILEIIFHLKIDSLFLIAYLFFAISLGFGLLKVLTESQFSLLSAFIAFPLFLIFPKLFEKIVNNRKINQKDNKNQK
4TNJ Chain:T ((1-32))
-METITYVFIFACIIALFFFAIFFREPPRITKK---------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4TNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8835 for 112 contacts (-78.9/contact) +
2D Compatibility (PS) -3182 + (NN) 520 + (LL) 10960
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -3887.0 ( -34.71 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_4TNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TNJ-query.scw
PDB file :
Tito_Scwrl_4TNJ.pdb
: