Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVT---NLPAEKRAKYLSRVFQDPKMGTAPRMTVAENLLVA-KFRGEKRPLVPRKITNYTEEFQKLIARTGNGLDRHLETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVR-----DLNQAQKNKMAIADYYQLFD---------------------------------------------------------------------------------------------------------- |
1OXS Chain:C ((1-352)) | --MVRIIVKNVSKVFKKG---KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWAL--YPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKIL---------DIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137626 for 1927 contacts (-71.4/contact) +
2D Compatibility (PS) -25205 + (NN) -2505 + (LL) 1312
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -180124.0 ( -93.47 by residue)
QMean score : 0.444
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