Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVT---NLPAEKRAKYLSRVFQDPKMGTAPRMTVAENLLVA-KFRGEKRPLVPRKITNYTEEFQKLIARTGNGLDRHLETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVR-----DLNQAQKNKMAIADYYQLFD----------------------------------------------------------------------------------------------------------
1OXS Chain:C ((1-352))--MVRIIVKNVSKVFKKG---KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWAL--YPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKIL---------DIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK


General information:
TITO was launched using:
RESULT:

Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137626 for 1927 contacts (-71.4/contact) +
2D Compatibility (PS) -25205 + (NN) -2505 + (LL) 1312
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -180124.0 ( -93.47 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_1OXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXS-query.scw
PDB file : Tito_Scwrl_1OXS.pdb: