Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKHQSRCKPDSPKKLMELNMTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKV-DYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK |
4EQQ Chain:A ((6-107)) | -----------------------------------------------------------------------------------------------------------PEFSKVPKEYRTAVSKAKQYASTVHMSKEELRSQLVS--------FDKYSQDASDYAVENSGIDYNKQALEKAKQYQDTLSMSPDAIRDQLVSF--DKFTQEEADYAVANLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -454 for 776 contacts (-0.6/contact) +
2D Compatibility (PS) -10875 + (NN) -3469 + (LL) 8192
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -14306.0 ( -18.44 by residue)
QMean score : 0.626
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