Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILTVTMNPSIDISYPLDVFKMDTVNRVAEVSKTAGGKGLNVTRVLAEIGDNVAATGLIGGTNGHFLLQHLPQ-NIQAFFYEIAGDTRNCIAILHEGQQTEILEAGPTIAAEEVNGFLHHYRSLMGATDVVAISGSLPAGLPTEFYVQLVEIAHQFGNKVVLDCSGVALQAALGSPVKPTAIKPNNEELSQLLGREVSKDLNELKEVLSEPLFEGIEWIIVSLGADGAFAKHWDTFYKVDIPKIEVVNPVGSGDSTVAGISSALSHQVDDYSLLKKANVLGMLNAQEKMTGHVNVSKYDNLYNQITVKEV
2JGV Chain:A ((22-330))-ILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV


General information:
TITO was launched using:
RESULT:

Template: 2JGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178398 for 2623 contacts (-68.0/contact) +
2D Compatibility (PS) -33144 + (NN) -9584 + (LL) 208
1D Compatibility (HY) -32400 + (ID) 9500
Total energy: -262818.0 ( -100.20 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2JGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JGV-query.scw
PDB file : Tito_Scwrl_2JGV.pdb: