Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------MKFLDLFAGIGGFRLGLESQGHECLGFCEIDKFARKSYKAIFETEGEVEFHDIRQVTDQDFRKFRGQVDIICVGFPCQAFSLAGRRLGFEDTRGTLFFELARAAQQIQPRFLFLENVKGLLSHDKGATFRTILTTLDELGYDVEWQVLNSKDFQVPQNRERVFLIGHSRRYRPRFLFPLRREGSPTDIERLGNINPSKHGMSGQVYLTSGLAPTLTRGKGEGTKIAVPVLTPDRLEKRQNGRRFKDNQDTMFTLTAQDKHGVVVAGNLPTAFVQTGRVYDISGISPTITTMQGGDKVPKILLRETLPHLKIKEATKTGFAKATLGDSVNLAYPKSNSHRGRVGQGISNTLTTSGNMGVVVAALEYRKDKWYEVTGIVLDGKLYRLRIRRLTPRECFRLQGFPDWAYERAEAVSSKSQLYKQAGNSVTVNVIAAIAEKFRKIEEEEHETLT |
6MHT Chain:A ((1-327)) | MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG---EKPEGDITQVNEKTIPD----HDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLL-----------------------------PDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGG------------QGERIYSTRGIAITLSA-YGGGIFAKTGGYLVN---------------GK---------------------------------------------------------------TRKLHPRECARVMGYPD---SYKVH-PSTSQAYKQFGNSVVINVLQYIAYNIGSSLNFKPY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 6MHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109485 for 2512 contacts (-43.6/contact) +
2D Compatibility (PS) -33683 + (NN) -12955 + (LL) 7080
1D Compatibility (HY) -18800 + (ID) 5950
Total energy: -173793.0 ( -69.19 by residue)
QMean score : 0.443
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