Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEAIIAKKAEQVELIAEKM----KAAASIVVVDSRGLTVEQDTNLRRSLRES---DVEFKVIKNSILIRAAEKAGLEDLKELFVGPSAVAFSNE-DVIAPAKVISDFAKD--AEALEIKGGSVDGKFTSVEEINALAKLPNKEGMLSMLLSVLQAPV-----------RNVAYAVKAVAEKDEEVA
1ZAX Chain:A ((5-177))
----------QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIIYNFYKDKKADLSRLKGGFLEGKKFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFALSGILRNLVYVLNAIKEKK----
General information:
TITO was launched using:
RESULT:
Template:
1ZAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49965 for 1015 contacts (-49.2/contact) +
2D Compatibility (PS) -16729 + (NN) -8815 + (LL) 1796
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -89163.0 ( -87.85 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_1ZAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZAX-query.scw
PDB file :
Tito_Scwrl_1ZAX.pdb
: