Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNRKDDHIKYALKYQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGGSEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDEDDSYPTTDLYPDLKLATNIGLDKPLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWRSHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIENQRGRDRSYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDDVIAILNSWKEDLRMIMCALNCKKITDLRQVNYILYGQLKEANAK |
| 3SR7 Chain:B ((53-365)) | ------------------YNSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAM------GKEVNEKLAQVADTCGLLFVT---------------------PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQEL---------RSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR---------------RSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVDYLLYGRLREGQRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225038 for 2177 contacts (-103.4/contact) +
2D Compatibility (PS) -28308 + (NN) -8838 + (LL) 2244
1D Compatibility (HY) -38400 + (ID) 8850
Total energy: -307190.0 ( -141.11 by residue)
QMean score : 0.643
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