Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIVVPVMPRSLEEAQEIDLSKFDSVDIIEWRADALPKDDIINVAPAIFEKFAGHEIIFTLRTTREGGNIVLSDAEYVELIQKINSIYNPDYIDFEYFSHKEVFQEMLEFPNLVLSYHNFQETPENIMEIFSELTALAPRVVKIAVMPKNEQDVLDVMNYTRGFKTINPDQVYATVSMSKIGRISRFAGDVTGSSWTFAYLDSSIAPGQITISEMKRVKALLDAD
3L9C Chain:A ((1-225))
MKIVVPVMPQNIEEANQLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEETPENLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASL-------QISLADMRKIKEVLDAN
General information:
TITO was launched using:
RESULT:
Template:
3L9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144448 for 1744 contacts (-82.8/contact) +
2D Compatibility (PS) -23950 + (NN) -10565 + (LL) -96
1D Compatibility (HY) -31200 + (ID) 7650
Total energy: -217909.0 ( -124.95 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3L9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9C-query.scw
PDB file :
Tito_Scwrl_3L9C.pdb
: