Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHIKAENIIVSYDQKEIINNLSLSILNQKITTIIGANGCGKSTLLKALTRIHKIKDGTITIDGHDIAHLPTKEIAKKIALLPQVLEATEGITVYELISYGRFPHQKYLGNLTNDDRSKIHWAMEMTNVAQFANRDVDDLSGGQRQKVWIAMALAQ------DTDTIFLDEPTTYLDMNHQLEVLELLKKLNNETQKTIIMVLHDLNLSARYSDYLVAMKTGKIIYEGSPSQIMTKDIIKDIFKIDAHIIQDPISKQPVLLSYQLSTDQN
4G1U Chain:C ((12-260))---LEASHLHYHVQQQALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAP---YGGS---QDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLVACGTPEEVLNAETLTQWYQADLGVSRHPESALPQIYLRQ------


General information:
TITO was launched using:
RESULT:

Template: 4G1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163507 for 1914 contacts (-85.4/contact) +
2D Compatibility (PS) -26413 + (NN) -12324 + (LL) 1328
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -223116.0 ( -116.57 by residue)
QMean score : 0.451

(partial model without unconserved sides chains):
PDB file : Tito_4G1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G1U-query.scw
PDB file : Tito_Scwrl_4G1U.pdb: