Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVHLEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
| 3O0P Chain:A ((47-252)) | ----------------------------------------------QTQDFERAAKKLSQKEINRRMALAQAYNDSLNNVHLEDPYEKKRI--GIAEYARMLEVSEKIGIISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKG----------HL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73202 for 1539 contacts (-47.6/contact) +
2D Compatibility (PS) -21143 + (NN) -8239 + (LL) 8832
1D Compatibility (HY) -25200 + (ID) 9550
Total energy: -128502.0 ( -83.50 by residue)
QMean score : 0.469
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