Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHL-RFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPII---YLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
4W6V Chain:A ((217-281))
--------------------------LDSSWNKPT----GRWVTAIMAVVVVIIALIS----------QGVIPINPVMIASLLVYVIAASVTLYFIYLFAFAKMSRKDRARLLVCFILLV
General information:
TITO was launched using:
RESULT:
Template:
4W6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15048 for 190 contacts (-79.2/contact) +
2D Compatibility (PS) -5562 + (NN) -521 + (LL) 4048
1D Compatibility (HY) -9600 + (ID) 1100
Total energy: -27783.0 ( -146.23 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_4W6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W6V-query.scw
PDB file :
Tito_Scwrl_4W6V.pdb
: