Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLN-PNRKLRLEREKLAKEKG
2BKF Chain:A ((47-82))
----QIKYLDEENEEVSIN---SQGEYEEALKMAVKQGNQLQMQVHEG-----
General information:
TITO was launched using:
RESULT:
Template:
2BKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6604 for 174 contacts (-38.0/contact) +
2D Compatibility (PS) -3921 + (NN) -3892 + (LL) 844
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -15523.0 ( -89.21 by residue)
QMean score : 0.722
(partial model without unconserved sides chains):
PDB file :
Tito_2BKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKF-query.scw
PDB file :
Tito_Scwrl_2BKF.pdb
: