Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFLHTCIRVKDLDASIAFYQEALGFKEVRRNDFPENQFTLVYMALEDD-PSYELELTYNYDHEAYDLGNGYGHIAVGVDDLETTYDAHQKAGYSVTKISGLPGKPNMFYFIQDPDGYKIEVIRLSQFKAD
4MTR Chain:B ((1-124))
MRILHSMLRVADLEAALEFYTRALDMRLLRRRDYPEGRFTLAFVGYQDERAAAALELTHNWDRDGYTQGDGYGHLAIEVEDAAVTCARARALGYRVTR---------VIAFLEDPDGYKVELIQKG-----
General information:
TITO was launched using:
RESULT:
Template:
4MTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67281 for 763 contacts (-88.2/contact) +
2D Compatibility (PS) -12411 + (NN) -5712 + (LL) 212
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -100492.0 ( -131.71 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_4MTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTR-query.scw
PDB file :
Tito_Scwrl_4MTR.pdb
: