Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYN-IRGSLAMANAG---ADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
2POE Chain:A ((15-177)) | -------------------------------------------------------------------------YFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYG---------RYFDDEIYPELKYDRRGILSMASKGAKKPNTNGSQFFITYSS--L----------------------PQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53482 for 1250 contacts (-42.8/contact) +
2D Compatibility (PS) -17063 + (NN) -7416 + (LL) 6868
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -85643.0 ( -68.51 by residue)
QMean score : 0.596
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