Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVLETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPI-VSFPEIDAPTTMDNEGRIITLELENCYITQVYTPNAGDGLKRLGDRQIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTDEERQGFTNLL-AKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGDRQDHTPIILEIEL |
4IEM Chain:D ((61-317)) | LKICSWNVDGL---------RAWIKKKGLDWVKEEAPDILCLQETKCS-ENKLPAELQELPGLSHQY---WSAPSD--KEGYSGVGLLSRQ--CPLKVSYGIGD--EEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYM-MNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89801 for 2154 contacts (-41.7/contact) +
2D Compatibility (PS) -27352 + (NN) -9075 + (LL) 956
1D Compatibility (HY) -19200 + (ID) 5050
Total energy: -149522.0 ( -69.42 by residue)
QMean score : 0.464
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