Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTFYEYPKCTTCRSAKKELTELGLTFEAIDIKSNPPKASLLKELLENSPYDLKKFFNTSGNSYRELGLKDKFDDLTLDQALDLLASDGMLIKRPLLVKDNKILQIGYRTKYKDLNLV
3FZ4 Chain:A ((6-120))
--TFYEYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGLKDKLHQLSLDEAANLLASDGMLIKRPLLVKEGKIVQIGYRTAYEDLDF-
General information:
TITO was launched using:
RESULT:
Template:
3FZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62640 for 837 contacts (-74.8/contact) +
2D Compatibility (PS) -12772 + (NN) -7721 + (LL) 492
1D Compatibility (HY) -15600 + (ID) 4000
Total energy: -102241.0 ( -122.15 by residue)
QMean score : 0.789
(partial model without unconserved sides chains):
PDB file :
Tito_3FZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FZ4-query.scw
PDB file :
Tito_Scwrl_3FZ4.pdb
: