Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFSVKTFNNINQIGLQELGNRFQIDGD-----------MSENPDAYIIRSQ-NLHNQDF--PSNLKAIARAGAGTNNIPIEEASAQGIVVFNTPGANANAVKEAVIAALLLSARDYLGANRWVNTLTGTDIPKQIEAGKKAFAGNEIAGKKLGVIGLGAIGARIANDARRLGMTVLGYDPYVSIETAWNISSHVQRVKEIKDIFETCDYITIHVPLTNETKHTFDAEAFSIMKKGTTIINFARAELVNNQELFKAIETGVVKRYITDFG------DKELLNQKGITVFPHVGGSTDEAELNCAIMASQTIRCFMETGEITNSVNFPN------------------------------------------------------------------------------------------------------------------------VHQIQT---------APFRITLINKNVPNIVAKISTAVSELGINIDNIIN--RSKGDYAYTLIDLDETDNNKISTLIEEFEGDENIVRVRLIAKQQ |
| 1YGY Chain:A ((4-528)) | -LPVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAV-PEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREH---------TWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--LGIE-LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGGGVVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERGVTAEICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVP---DDVRTAIAAAVDAYKLEVVDLS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201289 for 2971 contacts (-67.8/contact) +
2D Compatibility (PS) -41377 + (NN) -16647 + (LL) 1072
1D Compatibility (HY) -20000 + (ID) 5100
Total energy: -283341.0 ( -95.37 by residue)
QMean score : 0.549
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