Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIETLTQKNHRSDSGRNHIVLFEPQIPANTGNIARTCAATNAPLHIIRPMGFPIDDKKMKRAGLDYWDKLDVSFYDSLEEFMLSCRGKVHLISKFADKVYSDENYNDDQDHYFMFGREDKGLPETFMREHAEKALRIPMNDEHVRSLNVSNTVCMIVYEALRQQSFPNLELSHTYENDKLK
3L8U Chain:A ((15-175))
--------------LGRNHVVLFQPQIPANTGNIARTCAATNTSLHIIRPMGFPIDDKKM------YWD-LDVHFYDSLNDFMNICSGKLHLITKFANKTYSDENYDDSEHHYFLFGREDKGLPEEFMRQHSEKALRIPVNDQHVRSLNLSNTVCMIVYEALRQQDFIGLELSHT-------
General information:
TITO was launched using:
RESULT:
Template:
3L8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97693 for 1107 contacts (-88.3/contact) +
2D Compatibility (PS) -16323 + (NN) -5464 + (LL) 1504
1D Compatibility (HY) -20400 + (ID) 6250
Total energy: -144626.0 ( -130.65 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3L8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L8U-query.scw
PDB file :
Tito_Scwrl_3L8U.pdb
: