Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTI-LPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNI-TDTSFLIGD-----GTGRGSANANYFVFEADEYERHFMPYHPEYSIITNIDFDHPDYFTG-LEDVFNAFNDYAKQVQKGLFIYG------EDSKLHEITSKAP--IYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRF----------TEKIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHSDLVTV---------ENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 4HV4 Chain:A ((26-480)) | -----HFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQH-LTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVA-AREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHN----LPFYGRAVMCIDDPVVRELLPRVGRHITTYGFSDDADVQIASYRQEGPQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVAVATEEGIEDEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDDYGHHPTEVDATIKAARAGWPDKRIVMLFQPHRYTRTRDLYDDFANVLSQVDVLLMLDVYAAGEPPIPG-ADSRALCRTIRNRGKLDPILVPDSESAPEMLAQILNGEDLILV-QGAGNIGKIARKLAEHKLQPQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233952 for 3530 contacts (-66.3/contact) +
2D Compatibility (PS) -45338 + (NN) -22620 + (LL) 1164
1D Compatibility (HY) -22800 + (ID) 6950
Total energy: -330496.0 ( -93.62 by residue)
QMean score : 0.460
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