Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTMILIAIIALFVIWLIVAYNSLVRSRMHTKESWSQIDVQLKRRNDLIPNLIETVKGYAAYEGKTLEKIAELRAQVAKANTPAEAM-------TASNELTRQLSSILAVAENYPDLKANNSFVKLQEELTNTENKISYSRQLYNTTTSNYNVKLETFPSNIVGKLFGFKPSQFLETPEEEKEVPKVSFDF
3SDP Chain:B ((29-114))------------------------------------------KHHNTYVVNLNNLVPGTPEFEGKTLEEIVK-SSSGGIFNNAAQVWNHTFYWNCLSPDAGGQPTGALADAIN----AAFGSFDKFKEEFTKTSVGTFGSGWAWLVKADGSLALCSTIGAGAPLTSGDTPLLTCDVWEHAYYIDYRNLRPK


General information:
TITO was launched using:
RESULT:

Template: 3SDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16692 for 412 contacts (40.5/contact) +
2D Compatibility (PS) -8308 + (NN) -774 + (LL) 5212
1D Compatibility (HY) -1600 + (ID) 1450
Total energy: 9772.0 ( 23.72 by residue)
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_3SDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SDP-query.scw
PDB file : Tito_Scwrl_3SDP.pdb: