Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNLLEKTRKITSILQRSVDSLDAELPYNTMAAQLADIIDCNACIINGGGNLLGYAMKYKTNTDRVEEFFETKQFPDYYVKSASRVYDTEANLSVDNDLSIFPVETKENFQDGITTIAPIYGGGMRLGTFIIWRNDKEFSDDDLILVEIASTVVGIQLLNLQTENLEENIRKQTAVTMAINTLSYSEMKAVAAILGELDGLEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVINEGIFDKLKEYN
2B18 Chain:A ((10-164))
-MALLQKTRIINSMLQAAAGK---PVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99501 for 1178 contacts (-84.5/contact) +
2D Compatibility (PS) -16618 + (NN) -5582 + (LL) 8620
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -131631.0 ( -111.74 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2B18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B18-query.scw
PDB file :
Tito_Scwrl_2B18.pdb
: