Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQKVMATLLLSTLVLSLSSPLVTLAETINPETSLTMATASTESSSEAEKQEKTQPTDSETASPSAEGSISTEKTEIGTTETSSSNESSSSSSHQSSSNEDAKTSDSASTASTPSTNTTNSSQADSKPGQSTKTELKPEPTLPLVEPKITPAPSQIESVQTNQNASVPALSFDDNLLSTPISPVTATPFYVEHWSGQDAYSHYLLSHRYGIKAEQLDGYLKSLGIQYDSNRINGAKLLQWEKDSGLDVRAIVAIAVLESSLGTQGVAKMPGANMFGYGAFDHDSSHASAYNDEEAIMLLTKNTIIKNNNSSFEIQDLKAQKLSSGQLNTVTEGGVYYTDNSGTGKRRAQIMEDLDRWIDQHGGTPEIPAALKALSTASLADLPSGFSLSTAVNTASYIASTYPWGECTWYVFNRAKELGYTFDPFMGNGGDWQH---KAGFETTHSPKVGYAVSFSPGQAGADGTYGHVAIVEEVKKDGSVLISESNAMGRGI-VSYRTFSSAQAAQLTYVIGHK |
| 2K3A Chain:A ((49-152)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANLYTAGQCTWYVYDK---VGGNIGSTWGNANNWASAASSAGYTVNNSPEAGSILQSTAGG------YGHVAYVENVNSDGSVEVSEMNYNGGPFSVSERTISAGEASSYNYIHLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58366 for 701 contacts (-83.3/contact) +
2D Compatibility (PS) -10991 + (NN) -7464 + (LL) 20496
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -64775.0 ( -92.40 by residue)
QMean score : 0.594
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