Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFHQLSDKINIEILKQKTSLDLEVSQKKLAKEEELKNIIKGEDQRFLVIVGPCSADNPKAVLTYAKRLAKLEAAFKDKMFLVMRVYTAKPRTNGDGYKGLVH------HSDKLGVFFQARKMHYDIIRETGLLTADELLYPEMLSVMDDLVSYYAIGARSVEDQGHRFISSGIDAPVGMKNPTSGNLRVMLNAVYAAQNQQELFYQN-----KQVRTDGNLLSHVILRGYHNADYRSIPNYHYENLLETITHYEETDLQNPFIVVDTNHDNSGKQFLEQIRIVKSVLADRQWHTKIRNYVRGFLIESYLEDGRQDKPDVFGKSITDPCLGWDKTEMLIRDIYNSL----- |
| 1QR7 Chain:A ((8-350)) | LRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTT-VGWKGLINDPHMDNSFQINDGLRIARKLLLDIND-SGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKE------PNYSAKHVAEVKEGLNKAGL-PAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEK---AIIGVMVESHLVEGNQSLLA-YGKSITDACIGWEDTDALLRQLANAVKARRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134379 for 2808 contacts (-47.9/contact) +
2D Compatibility (PS) -34899 + (NN) -16094 + (LL) 904
1D Compatibility (HY) -18000 + (ID) 5650
Total energy: -208118.0 ( -74.12 by residue)
QMean score : 0.518
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