Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLMWDVLTGKESVRTLKKQLDKELIHSVYAPRKRSKFHDIITSHHKEI----DEVAINTKTAIHKVANQLDEAIKGEFRSKVEESIESNQQKYNHL
4R5G Chain:A ((157-216))
--------------------------------QTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQK-
General information:
TITO was launched using:
RESULT:
Template:
4R5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3441 for 317 contacts (-10.9/contact) +
2D Compatibility (PS) -5813 + (NN) 451 + (LL) 2816
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -8737.0 ( -27.56 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_4R5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R5G-query.scw
PDB file :
Tito_Scwrl_4R5G.pdb
: