Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPIGIYEKATPKHFNWLERLQFAKELGFDFVELSIDESDERLARLEWSKEERLELVKAIFETGVRVPTITFSGHRRFPMGSNNPEKEARAMDMMKKCIVFAQDIGIRNIQLAGYDVYYEEKSPETRARFIKNLRQACTWAEEAQVILSIEIMDDPFMNSIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDLWSEFYNGHRSIAALHIKDTYAVTETSKGQFRDVPFGQGCVDWEEMFAVIKKTNYNGPFLIEMWSENCETVEETRAAIKEAQDFLYPLMEKTGVK
3CQI Chain:B ((18-291))---PLGIYEKALPA--CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKD------TKP--FKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWS---ETAEDPAAEVAKARDWVKARMAKAGMV


General information:
TITO was launched using:
RESULT:

Template: 3CQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149676 for 2284 contacts (-65.5/contact) +
2D Compatibility (PS) -29754 + (NN) -19332 + (LL) 1200
1D Compatibility (HY) -29600 + (ID) 7400
Total energy: -234562.0 ( -102.70 by residue)
QMean score : 0.648

(partial model without unconserved sides chains):
PDB file : Tito_3CQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CQI-query.scw
PDB file : Tito_Scwrl_3CQI.pdb: