Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYQDDFYQAVNGEWAKTAVIPDDKPRTGGFSDLADDIEALMLSTTDKWLADENKPSDTILNHFIAFHKMTADYQKREEVGVSPVLPLIEEYKGLQSFSEFASKVAEYELEGKPNEFPFGVAPDFMNAQLNVLWAEAPGIILPDTTYYSEDNEKGKELLAFWRKSQEDLLPLFGLSEQEIKDILDKVLALDAKLAQYVLSREESSEYVKLYHPYNWEDFTKLAPELPLDAIFQKILGQKPDKVIVPEERFWTEFASDYYSESNWELLKADLILSAANAYNAYLTDDIRIKSGVYSRALSGTPQAMDKKKAAYYLASGPYNQALGLWYAGEKFSPEAKADVEHKIATMIDVYKSRLEKADWLAQSTREKAIMKLNVITPHIGYPEKLPETYTKKIIDPKLSLVENATNLDKISIAYGWSKWNKPVDRSEWHMPAHMVNAYYDPQQNQIVFPAAILQEPFYALEQSSSANYGGIGAVIAHEISHAFDTNGASFDEHGSLNNWWTDEDFEAFKKLTDKVVEQFDGLESYGAKVNGKLTVSENVADLGGVACALEAAQRESDFSA-RDFFINFATIWRMKARDEYMQMLASVDVHAPAQWRTNITVTNFEEFHKEFDVKDGDNMWRPVEKRVIIW-- |
| 4IUW Chain:A ((4-633)) | LPRIQDDLYLAVNGEWQAKTPIPPDKSVVSADSNLTDDIRQKLVADLST---MTKTAKTLPLQYAARLFAKANDQTRRQQLGIEPVRDRISFLMALTTLDQFRSAMPKLVADQYVLPISPYVDADMHDAEHNILNLGGPDTILPDAAMYNQEDAENAADLAAWSQMAAAMLAAVGFSQTDQTAYVEAAKRFDRRLADYVPANVDLAVDSTYDNPLSWQAFEDAAGYLGIPQAFATYMPQTPAKVNAVVPAY-LPHLSKLLTPDNYSEWHAWMVINELLTCATYLSDDLRQLAGQYDRFLAGQPEASSWTKHAFGIANEYFDDVIGQYYGQTYFGADAKADVTAMVKQILAQYRVQLENNTWLSPATKQKAMRKLATMQVKMGYPARLFSLYDHLSVDVDDDLLTAILKLSAQTQAFWFKQLGQTVDRNQWNMPGHLVNASYDPLKNDITFPAGILQPPYYSLKWTRAENLGGTGATIGHEISHSFDNNGALYDEYGNLHNWWTPADKQAFDQLVKAMAAQFDGRDYEGVKVNGTLTVSENMADNAGMDVALALLGDQPDVKDLQAFFITYARSWATKMRPERAKTVLRQDVHAPATLRVNVPVQNFPAWYQAFNVQPQDGMYRQPQKRLTIWHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231554 for 5409 contacts (-42.8/contact) +
2D Compatibility (PS) -66824 + (NN) -31278 + (LL) 632
1D Compatibility (HY) -34800 + (ID) 10350
Total energy: -374174.0 ( -69.18 by residue)
QMean score : 0.460
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