Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALINENSQASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
4U8E Chain:A ((1-212))
MKIALINENSQASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITG-GAGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
General information:
TITO was launched using:
RESULT:
Template:
4U8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121609 for 1748 contacts (-69.6/contact) +
2D Compatibility (PS) -23337 + (NN) -15411 + (LL) 56
1D Compatibility (HY) -30800 + (ID) 10500
Total energy: -201601.0 ( -115.33 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_4U8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U8E-query.scw
PDB file :
Tito_Scwrl_4U8E.pdb
: