Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADVKVVNNEDSRGQKQDLKAKLFHIKIGSVPLPVYVCLALLILLAGFLQKLPVNMLGGFAVILTMGWFLGTIGASIPGFKNFGGPAILSLLVPSILVFFNLINKNVLESTNMLMKQANFLYFYIACLVSGSILGMNRKMLIQGLLRMIFPMLLGMVCAMMVGTFVGVILGLEWRHTLFYIVTPVLAGGIGEGILPLSLGYSSITGVASEQLVAQLIPATIIGNFFAILCTALLNRLGEKKPHLSGQGQLVRLNKGEDMSDIIADHSGPIDVKKMGGGVLTACSLFIFG--HLLQQLTGFPGPVLMIVAAAILKYINVIPRETQNGAKQLYKFISGNFTFPLMAGLGLLYIPL-KDVVATLSIQYFIVVISVVFTVISVGFFVSRFLNMNPVEAGIISA-------CQSGMGGTGDVAILSTADRMNLMPFAQV-ATRLGGAITVITMTAILRMLF---------------- |
| 4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAE-KLKIPDIPLLLLLGLII--GPFLQIIP-------------------SDSAMEIFEYAGPIGLIFILLGGAFTM----RISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPA----------------TLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSN------------PLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFH---EYVAPLVLGGAMLLLYVGDDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDIDYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347105 for 3354 contacts (-103.5/contact) +
2D Compatibility (PS) -38726 + (NN) 4530 + (LL) 5564
1D Compatibility (HY) -30000 + (ID) 3500
Total energy: -409237.0 ( -122.01 by residue)
QMean score : 0.280
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