Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGENIYLQRTQIGMTQENLSDYLHLTKTTISKWENNQAKPDIDYLILMANLFDISLDDLVGYQKTLSDDQRNQLIKDLKIKANVLSERDFFQEVKELSKQFPNDFKT--LLIMINMVLSNLTNLNDSEMKEWSLSTLNKIISKT---VVESDLQTAIMFKTVVLFHNLEYDEVINLYQNSPYKL-----------GEELLLANSFFAKGDVYRAKQVLQVEIYQQILLVCEYLLSLSTFEVEENKGDIFERLEHMIEAFQLNSLHPNTVIKCYYSLACHYS-KSDD-DKALGYLKQCFKSLKQLLQRFELHGDTFFYTIDDWLETIPTGIAPPTSQLQVIERVEDLFQNSQFKELSGHKEFQQMIQKLNDLKKDY |
3U3W Chain:A ((5-268)) | KLGSEIKKIRVLRGLTQKQLSENI-CHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK---KVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN-----------------------------------SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNK----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86076 for 1784 contacts (-48.2/contact) +
2D Compatibility (PS) -25974 + (NN) -13887 + (LL) 7464
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -125723.0 ( -70.47 by residue)
QMean score : 0.470
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