Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKELITKQKTWEIILLVVSGILIPVILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGNMKQAITEIIISQIKKVETHIPDIQLDGGFYEKFQKYLLIGYNNGNIESKVETI--RLQVCSVEQNTFCENLIDEI-FSDDKIIDSGSVESIFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAGPGVEKLPLIDITKDVTKATAKTHQILEQGANQVGFNILVDRTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK |
| 4LO5 Chain:B ((105-186)) | --------------------------------------------------------------------------------------------------------------YNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNYYIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -367 for 262 contacts (-1.4/contact) +
2D Compatibility (PS) -8657 + (NN) -1139 + (LL) 9704
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -6859.0 ( -26.18 by residue)
QMean score : 0.167
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