Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYQEFLSEKDSLSFEVCTQYFQDLVNSLDEVDEYSIIYWKDFITASLIYSQSRGEWLLLSREEKHAKDDTRTTKHNKFIYTLKIYIAYSKQKGYEFPWFESIKDNRKQLGDLACYIAYIYAVNAR
4F9B Chain:A ((102-172))
-LEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVH-RDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG
General information:
TITO was launched using:
RESULT:
Template:
4F9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12967 for 399 contacts (-32.5/contact) +
2D Compatibility (PS) -7199 + (NN) -456 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 750
Total energy: -27808.0 ( -69.69 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_4F9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F9B-query.scw
PDB file :
Tito_Scwrl_4F9B.pdb
: