Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEKMTNSENKRSKGFRMPGAFTILFILTIFSVLATWWIPAGSYSKLQFDTESSKLVVTDPNGKTVHVPATQTQLDKMNVKIKIKEFTSGAISKPVSVPNTYKRLKQNPAGIGSVTTSMVNGTIEAVDIMVFIMVLGGMIGVVRKSGAFESGLLALTKKTKGREFLLIFLVSLLMVLGGTLCGIEEEA--VAFYPILVPIFLAMGYDSIICVGAIFLASSVGTS----FSTINPFSSVIASNAAGISFTEGLSWRTAG--CIAGAIFVVVYLHWYAKKIKANPEFSYSYEDRVEFNAKWGMTTNHTPSLFTIRQKIIL---SLFVISFPLMVW------GVMSQGWWFPTMASSFLAITIIIMFLTATGANGI----------GERDVVDEFVNGASSLVGVSLIIGLARGINIILSQGYISDTMLYTASKLASHV--SGSVFIIVMMFIYFVLGFVVPSSSGLAVLSMPILAPLADTVGIPRSVVVMAYQFGQYAMLFLAPT----GLVMATLQMLDMKYSHWLKFVWPVVLFLLIFGGGLLVLQVLIL |
| 4R1I Chain:A ((99-473)) | ----------------------------------------------------------------------------------------------------------------------------------VLVSLLG--VGIAEKSGLISALMRLLLTKSPRK------LTTFMVVFTGILSNTASELGYVVLIPLSAVIFHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEANWFFMAASTFVIALIGYFVTEKIVEPQLG-PYQSDLSQEEK---DIRHSNEITPLEYKGLIWAGVVFIALSALLAWSIVPADGILRHPETGLVAGSPFLKSIVVFIFLL-FALPGIVYGRITRSLRGEREVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVGLAGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDSVTNIITPMMSYFGLIMATV----MKYKKDAGVGTLISMMLPYSAFFLIAWIALFC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252023 for 2676 contacts (-94.2/contact) +
2D Compatibility (PS) -34398 + (NN) -2787 + (LL) 9952
1D Compatibility (HY) -26400 + (ID) 4350
Total energy: -310006.0 ( -115.85 by residue)
QMean score : 0.207
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