Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFYIIDDDPTITMILQDIIEEDFNNTVVRVNNVSSKAYNELLIADVDIVLIDLLMPILDGVTLVQKIYKQRSDLKFIMISQVKDNDLRQEAYKAGIEFFINKPINIIEVKSVVKRVTDTIEMQKKLNTIQNLLENTPSYQKPITTSNLTKIRSILSYLGITSETAYTD----------ILNICELLLKQELNFAQFDFQKELSIDEHQQKII-----LQRIRRAVKKAMINMA---HLYID---DFENELTLQYANALF--------GFQNIHNEAQLIQG-KSMYGGKISLKHFFDELILQSKTF--------------------------------------------------------------------------------- |
| 1NY5 Chain:A ((1-384)) | MNVLVIEDDKVFRGLLEEYLSMK-GIKVESAER-GKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVF-ESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNV-ASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154008 for 1899 contacts (-81.1/contact) +
2D Compatibility (PS) -28091 + (NN) 1957 + (LL) 648
1D Compatibility (HY) -13200 + (ID) 2100
Total energy: -194794.0 ( -102.58 by residue)
QMean score : 0.457
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