Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQKVKKRADYLMSFGLLTLPHQLMKLVLMEQIYRAFMIRQGTPYHK
4FAK Chain:A ((5-163))
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK
General information:
TITO was launched using:
RESULT:
Template:
4FAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94891 for 1198 contacts (-79.2/contact) +
2D Compatibility (PS) -17634 + (NN) -10839 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 3950
Total energy: -142514.0 ( -118.96 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_4FAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FAK-query.scw
PDB file :
Tito_Scwrl_4FAK.pdb
: