Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVIDEACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEERFNHQAEVVSGVLEEECGGMLSAFFRELRKKKKAARKNLSE
2B3J Chain:B ((4-154))
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRAN----------
General information:
TITO was launched using:
RESULT:
Template:
2B3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98323 for 1301 contacts (-75.6/contact) +
2D Compatibility (PS) -16565 + (NN) -8553 + (LL) 752
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -142539.0 ( -109.56 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2B3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3J-query.scw
PDB file :
Tito_Scwrl_2B3J.pdb
: