Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKSVFHAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVLTNPTYYGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYLNRLQSSSPSYPIMASLDIARAYVQHIIEEQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILERANIFTELADENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
2X3L Chain:A ((5-443)) | ---PILNKLESLNQEEAISLHVPGHKNMTIGH-----LSQLSMTMDKTEIPGLDDLHHPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSP------------LTNHYNKVNLHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQ-GFPDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKN-APYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENKGFEMLQV-----------DDPLKLLIK-YEGFTGHDIQNWFMNAHIYLELADDYQALAILPLWHHD--DTYLFDSLLRKIEDMILPK---------KSTQLLTTE----GNYKPKWCDLKKAKGKVLARHIVPYPPGIPIIFKGETITENMIELVNEYLETGMIVEG---IKNNKILV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183861 for 3600 contacts (-51.1/contact) +
2D Compatibility (PS) -44992 + (NN) -10172 + (LL) 4304
1D Compatibility (HY) -36400 + (ID) 7950
Total energy: -279071.0 ( -77.52 by residue)
QMean score : 0.415
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