Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTA--NG---PAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
2EQJ Chain:A ((13-64)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSS-KSWVLWKDIQTG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16500 for 277 contacts (-59.6/contact) +
2D Compatibility (PS) -4527 + (NN) 3904 + (LL) 16676
1D Compatibility (HY) -800 + (ID) 300
Total energy: -1547.0 ( -5.58 by residue)
QMean score : 0.237
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