Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIVDLCTGNGIVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK |
| 3LPM Chain:A ((6-249)) | -LKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP-----------------------MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEILYG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15430 for 1776 contacts (-8.7/contact) +
2D Compatibility (PS) -22216 + (NN) 2839 + (LL) 2408
1D Compatibility (HY) -5600 + (ID) 3700
Total energy: -41699.0 ( -23.48 by residue)
QMean score : 0.231
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