Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTIDLADRIEL--TELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRAL-KLDGIEHPDVQG----MIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 3PYE Chain:A ((9-280)) | -----RVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLEL-VGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126077 for 2228 contacts (-56.6/contact) +
2D Compatibility (PS) -28998 + (NN) -11850 + (LL) 2472
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -188153.0 ( -84.45 by residue)
QMean score : 0.507
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