Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHK--PARSCVEVARLPKDALVEIEVIALVK
1QD9 Chain:A ((1-124))
-TKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDT--HKPARSCVEVARLPKDALVEIEVIALVK
General information:
TITO was launched using:
RESULT:
Template:
1QD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66754 for 941 contacts (-70.9/contact) +
2D Compatibility (PS) -13374 + (NN) -5776 + (LL) 316
1D Compatibility (HY) -17200 + (ID) 6100
Total energy: -108888.0 ( -115.72 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1QD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QD9-query.scw
PDB file :
Tito_Scwrl_1QD9.pdb
: